Query g2pDB post-translational modifications

by an ENSEMBL protein, gene or transcript accession number or keywords

Database version (Genome build/ENSEMBL release):

37/70

38/76

38/78

Keywords/accession:     residue #s (optional):

Spreadsheet (.xlsx) format

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ENSP00000288943: DUSP2, dual specificity phosphatase 2 (GPMDB)

Gene: ENSG00000158050 Trans: ENST00000288943 Chr: -2:96143166–96145440 Biotype: protein_coding HGNC:3068 Sequence Length: 314 Legend Acetyl Dimethyl Hydroxy P/K Phosphoryl Ubiquitinyl Multiple

MGLEAARELECAALGTLLRDPREAERTLLLDCRPFLAFCRRHVRAARPVPWNALLRRRARGPPAAVLACLLPDRALRTRLVRGELARAVVLDEGSASVAELRPDSPAHVLLAALLHETRAGPTAVYFLRGGFDGFQGCCPDLCSEAPAPALPPTGDKTSRSDSRAPVYDQGGPVEILPYLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHCQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQVLCH

Acetyl (evidence) sites: 0 × NT

residue	codon	genome coordinates	protein	obs
None	-	-	-	-

Phosphoryl (evidence)

residue	codon	genome coordinates	protein	obs
None	-	-	-	-

Ubiquitinyl (evidence) sites: 2 × K

residue	codon	genome coordinates	protein	obs
K	TTT	96144800,96144801,96144802	157	10
K	CTT	96143904,96143905,96143906	288	105

Hydroxy P/K (evidence)

residue	codon	genome coordinates	protein	obs
None	-	-	-	-

Dimethyl (evidence)

residue	codon	genome coordinates	protein	obs
None	-	-	-	-

--> -->

<type 'exceptions.IOError'>

Python 2.7.10: C:\Python27\python.exe Wed Apr 24 06:32:11 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

X:\g2pDB\human\bin\g2pPTABx.py in ()

478                             wsRow+=1

479                         print ("</table>")

=>  480                 wb.save(filename = wbFile)

481

482 print """

wb = <openpyxl.workbook.workbook.Workbook object>, wb.save = <bound method Workbook.save of <openpyxl.workbook.workbook.Workbook object>>, filename undefined, wbFile = r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx'

C:\Python27\lib\site-packages\openpyxl\workbook\workbook.py in save(self=<openpyxl.workbook.workbook.Workbook object>, filename=r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx')

259             raise TypeError("""Workbook is read-only""")

260         if self.write_only:

261             save_dump(self, filename)

262         else:

=>  263             save_workbook(self, filename)

global save_workbook = <function save_workbook>, self = <openpyxl.workbook.workbook.Workbook object>, filename = r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx'

C:\Python27\lib\site-packages\openpyxl\writer\excel.py in save_workbook(workbook=<openpyxl.workbook.workbook.Workbook object>, filename=r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx', as_template=False)

237     """

238     writer = ExcelWriter(workbook)

=>  239     writer.save(filename, as_template=as_template)

240     return True

241

writer = <openpyxl.writer.excel.ExcelWriter object>, writer.save = <bound method ExcelWriter.save of <openpyxl.writer.excel.ExcelWriter object>>, filename = r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx', as_template = False

C:\Python27\lib\site-packages\openpyxl\writer\excel.py in save(self=<openpyxl.writer.excel.ExcelWriter object>, filename=r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx', as_template=False)

219     def save(self, filename, as_template=False):

220         """Write data into the archive."""

=>  221         archive = ZipFile(filename, 'w', ZIP_DEFLATED, allowZip64=True)

222         self.write_data(archive, as_template=as_template)

223         archive.close()

archive undefined, global ZipFile = <class 'zipfile.ZipFile'>, filename = r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx', global ZIP_DEFLATED = 8, allowZip64 undefined, builtin True = True

C:\Python27\lib\zipfile.py in __init__(self=<zipfile.ZipFile object>, file=r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx', mode='w', compression=8, allowZip64=True)

754             modeDict = {'r' : 'rb', 'w': 'wb', 'a' : 'r+b'}

755             try:

=>  756                 self.fp = open(file, modeDict[mode])

757             except IOError:

758                 if mode == 'a':

self = <zipfile.ZipFile object>, self.fp = None, builtin open = <built-in function open>, file = r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx', modeDict = {'a': 'r+b', 'r': 'rb', 'w': 'wb'}, mode = 'w'

<type 'exceptions.IOError'>: [Errno 2] No such file or directory: 'C:\\g2pDB\\human\\xlFiles\\g2pDB_ENSP00000288943.xlsx'
      args = (2, 'No such file or directory')
      errno = 2
      filename = r'C:\g2pDB\human\xlFiles\g2pDB_ENSP00000288943.xlsx'
      message = ''
      strerror = 'No such file or directory'